species:   Bodot
pid:       PID1085
parent:    Bd-milR38
paralog:   
locus:     SACU01000014.1:2604984-2605171
matures:   ['UGCGGUUGAGGGACGAGGCAGA', 'AUUGGGACGCGCUUCAGCUGCAGG']
srr:       SRR8374849
genome:    /Users/jax/+Genomes/Fungal_genomes/Bodot.GCA_011064635.1_ASM1106463v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374849.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374849.cram SACU01000014.1:2604984-2605171

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

  ***********************                                                                                                                                          ***********************  
CGGUGUCCGUUGCGGUUGAGGGACGAGGCAGAUGUGCAGGAACCUCAGGGUACGCACACGGGUAUCCAGUGCGAUGCCUGCGAAUCAGUGAGUUUCGAUAUAAUUUCUAGUGGCUUGACUUGUUGAAAAGCAUUUUCUGACAGUUUCCAGCCCAUCAUUGGGACGCGCUUCAGCUGCAGGACUUGCUU
.(((((((..(((((((((((..((...((((((.((.((((.((((((((((((((..((....)).))))).))))(((...((((((((((....(((........)))....))))))))))...)))....))))..).)))).)).))))..))...))..)))))))))))))))..))).
----------UGCGGUUGAGGGACGAGGCAGA------------------------------------------------------------------------------------------------------------------------------------------------------------ l=22 a=0 c
------------------------------------------------------------------------------------------------------------------------------------------------------------AUUGGGACGCGCUUCAGCUGCAGG-------- l=24 a=0 c*
---------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCUUCAGCUGCAGGACUUGC-- l=21 a=1 ma
----GUCCGUUGCGGUUGAGGGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------- l=21 a=0 ma*

---------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCUUCAGCUGCAGGACUUGC-- l=21 a=1 (ma)

mb-01011
ax-1011111
ku-01
ss-110111111110
fn-111
